STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOW14860.1Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (243 aa)    
Predicted Functional Partners:
AOW14859.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.696
AOW14858.1
Glycerol acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.590
AOW11985.1
Type II secretion system protein GspH; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.540
AOW14152.1
4-hydroxybenzoyl-CoA thioesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.531
AOW13531.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
     0.501
AOW13764.1
N-acylglucosamine 2-epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.499
AOW11779.1
5-carboxymethyl-2-hydroxymuconate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.492
AOW15440.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.488
AOW15149.1
Fe-S protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.447
AOW11983.1
General secretion pathway protein GspK; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.442
Your Current Organism:
Hydrogenophaga crassostreae
NCBI taxonomy Id: 1763535
Other names: H. crassostreae, Hydrogenophaga crassostreae Baek et al. 2017, Hydrogenophaga sp. LPB0072, JCM 31188, KACC 18705, strain LPB0072
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.