AOW14865.1 protein (Hydrogenophaga crassostreae)

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second shell of interactors

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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[Homology]

Score

AOW14865.1

AsnC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (157 aa)

Predicted Functional Partners:

AOW15866.1

0.534

AOW15867.1

0.502

AOW12144.1

0.494

AOW14864.1

0.485

Your Current Organism:

Hydrogenophaga crassostreae

NCBI taxonomy Id: 1763535
Other names: H. crassostreae, Hydrogenophaga crassostreae Baek et al. 2017, Hydrogenophaga sp. LPB0072, JCM 31188, KACC 18705, strain LPB0072

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AOW12144.1	AOW14865.1	LPB072_04065	LPB072_20610	AsnC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	AsnC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.494
AOW14864.1	AOW14865.1	LPB072_20600	LPB072_20610	Phenylalanine 4-monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	AsnC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.485
AOW14864.1	AOW15866.1	LPB072_20600	LPB072_20605	Phenylalanine 4-monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	4-hydroxyphenylpyruvate dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.967
AOW14865.1	AOW12144.1	LPB072_20610	LPB072_04065	AsnC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	AsnC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.494
AOW14865.1	AOW14864.1	LPB072_20610	LPB072_20600	AsnC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phenylalanine 4-monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.485
AOW14865.1	AOW15866.1	LPB072_20610	LPB072_20605	AsnC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	4-hydroxyphenylpyruvate dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.534
AOW14865.1	AOW15867.1	LPB072_20610	LPB072_20615	AsnC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	GNAT family N-acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.502
AOW15866.1	AOW14864.1	LPB072_20605	LPB072_20600	4-hydroxyphenylpyruvate dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phenylalanine 4-monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.967
AOW15866.1	AOW14865.1	LPB072_20605	LPB072_20610	4-hydroxyphenylpyruvate dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	AsnC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.534
AOW15867.1	AOW14865.1	LPB072_20615	LPB072_20610	GNAT family N-acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	AsnC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.502

Network Stats

number of nodes:

11

number of edges:

55

average node degree:

10

avg. local clustering coefficient:

1

expected number of edges:

22

PPI enrichment p-value:

2.42e-09

your network has significantly more interactions
than expected (what does that mean?)

Functional enrichments in your networkNote: some enrichments may be expected here (why?)
disable highlight explain columns

Biological Process (Gene Ontology)

GO-term

description

count in network

strength

signal

false discovery rate

GO:0000271

Polysaccharide biosynthetic process

11 of 49

1.8

4.87

7.38e-17

GO:0033692

Cellular polysaccharide biosynthetic process

4 of 32

1.54

1.36

0.00067

GO:0045227

Capsule polysaccharide biosynthetic process

2 of 2

2.44

1.21

0.0060

GO:0009103

Lipopolysaccharide biosynthetic process

2 of 9

1.79

0.74

0.0383

Cellular Component (Gene Ontology)

GO-term

description

count in network

strength

signal

false discovery rate

GO:0016021

Integral component of membrane

9 of 749

0.52

0.37

0.0131

Local Network Cluster (STRING)

cluster

description

count in network

strength

signal

false discovery rate

CL:1026

Polysaccharide biosynthetic process, and Nucleotide-diphospho-sugar transferases

11 of 74

1.62

3.78

2.55e-15

CL:1029

Polysaccharide biosynthetic process, and Nucleotide-sugar metabolic process

9 of 55

1.66

3.5

3.73e-12

CL:1030

Polysaccharide biosynthetic process, and NAD-dependent epimerase/dehydratase

7 of 40

1.69

2.98

4.38e-09

CL:1093

Mixed, incl. Protein tyrosine kinase activity, and Cell aggregation

3 of 6

2.14

1.84

0.00027

CL:1031

O-Antigen nucleotide sugar biosynthesis, and Glycosyl transferase family 2

4 of 31

1.56

1.46

0.00037

(more ...)

KEGG Pathways

pathway

description

count in network

strength

signal

false discovery rate

map00541

O-Antigen nucleotide sugar biosynthesis

3 of 27

1.49

0.85

0.0152

map00520

Amino sugar and nucleotide sugar metabolism

3 of 45

1.27

0.66

0.0312

Protein Domains (Pfam)

domain

description

count in network

strength

signal

false discovery rate

PF02397

Bacterial sugar transferase

3 of 3

2.44

1.85

0.00036

PF13727

CoA-binding domain

2 of 2

2.44

0.95

0.0185

PF01370

NAD dependent epimerase/dehydratase family

2 of 5

2.05

0.73

0.0429

Protein Domains and Features (InterPro)

domain

description

count in network

strength

signal

false discovery rate

IPR003869

Polysaccharide biosynthesis protein, CapD-like domain

3 of 3

2.44

1.63

0.00093

IPR003362

Bacterial sugar transferase

3 of 3

2.44

1.63

0.00093

IPR016667

Capsular polysaccharide synthesis, CpsB/CapC

2 of 2

2.44

0.82

0.0317

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