STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOZ91102.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (330 aa)    
Predicted Functional Partners:
AOZ91103.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.852
AOZ91105.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.809
AOZ91104.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.780
AOZ91106.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.767
AOZ91107.1
Pilus assembly protein CpaF; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.767
AOZ91108.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.767
AOZ91109.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.767
AOZ91110.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.760
AOZ91111.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.698
AOZ91112.1
Serine/threonine protein kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.683
Your Current Organism:
Paenibacillus crassostreae
NCBI taxonomy Id: 1763538
Other names: JCM 31183, KACC 18694, P. crassostreae, Paenibacillus crassostreae Shin et al. 2018, Paenibacillus sp. LPB0068, strain LPB0068
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