STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A3770_01p00210tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase. (512 aa)    
Predicted Functional Partners:
A3770_16p76860
Exosome complex exonuclease.
    
 
 0.937
A3770_02p10950
Putative exoribonuclease.
    
   0.916
A3770_02p12810
Uroporphyrinogen decarboxylase; Belongs to the uroporphyrinogen decarboxylase family.
   
 
 0.644
A3770_02p19390
Uroporphyrinogen decarboxylase; Belongs to the uroporphyrinogen decarboxylase family.
   
 
 0.644
A3770_07p46520
Uroporphyrinogen decarboxylase; Belongs to the uroporphyrinogen decarboxylase family.
   
 
 0.644
A3770_17p80460
tRNA dimethylallyltransferase; Belongs to the IPP transferase family.
 
  
 0.620
A3770_16p77490
RNA methyltransferase.
  
  
 0.484
A3770_05p38670
Ribosomal protein S5; Belongs to the universal ribosomal protein uS7 family.
  
  
 0.483
A3770_05p40100
Nucleotide excision repair protein.
   
 
 0.473
A3770_09p54480
Ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family.
  
  
 0.464
Your Current Organism:
Chloropicon primus
NCBI taxonomy Id: 1764295
Other names: C. primus, Chlorophyta sp. CCMP1205, Chloropicon primus Lopes dos Santos & Eikrem, 2017, Coccoid green alga CCMP1205, Prasino-clade-7_X-A2 sp. RCC717, Prasino-clade-7_X-A3 sp. RCC1019, Prasino-clade-7_X-A3 sp. RCC1032, Prasino-clade-7_X-A3 sp. RCC1043, Prasinophyceae sp. CCMP1205, Prasinophyceae sp. RCC1019 (clade 7X-A3), Prasinophyceae sp. RCC1032 (clade 7X-A3), Prasinophyceae sp. RCC1032 (clade VIIA), Prasinophyceae sp. RCC1043 (clade 7X-A3), Prasinophyceae sp. RCC717 (clade 7X-A2), coccoid chlorophyte sp. CCMP1205, coccoid prasinophyte sp. CCMP1205, prasinophyte sp. CCMP1205, prasinophyte sp. NIES-3671, prasinophyte sp. NIES-3671 (clade VIIA3), prasinophyte sp. RCC1019, prasinophyte sp. RCC1019 (clade VIIA3), prasinophyte sp. RCC1032, prasinophyte sp. RCC1032 (clade VIIA), prasinophyte sp. RCC1032 (clade VIIA3), prasinophyte sp. RCC1043, prasinophyte sp. RCC1043 (clade VIIA3), prasinophyte sp. RCC717, prasinophyte sp. RCC717 (clade VIIA2)
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.