STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A3770_01p02180Polyubiquitin. (457 aa)    
Predicted Functional Partners:
A3770_11p61230
Uncharacterized protein.
   
 0.996
A3770_05p35630
SCP2 domain-containing protein.
    
  0.982
A3770_05p38640
Ribosomal protein L40.
   
0.958
A3770_02p18000
JmjC domain-containing protein.
    
 0.946
A3770_01p07370
Polyubiquitin.
   
 
0.945
A3770_09p56340
E3 ubiquitin-protein ligase.
   
 0.938
A3770_13p70370
40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family.
   
 0.915
A3770_04p29230
40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.
   
 0.914
A3770_06p45020
40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family.
   
  0.912
A3770_07p49870
Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family.
   
 0.911
Your Current Organism:
Chloropicon primus
NCBI taxonomy Id: 1764295
Other names: C. primus, Chlorophyta sp. CCMP1205, Chloropicon primus Lopes dos Santos & Eikrem, 2017, Coccoid green alga CCMP1205, Prasino-clade-7_X-A2 sp. RCC717, Prasino-clade-7_X-A3 sp. RCC1019, Prasino-clade-7_X-A3 sp. RCC1032, Prasino-clade-7_X-A3 sp. RCC1043, Prasinophyceae sp. CCMP1205, Prasinophyceae sp. RCC1019 (clade 7X-A3), Prasinophyceae sp. RCC1032 (clade 7X-A3), Prasinophyceae sp. RCC1032 (clade VIIA), Prasinophyceae sp. RCC1043 (clade 7X-A3), Prasinophyceae sp. RCC717 (clade 7X-A2), coccoid chlorophyte sp. CCMP1205, coccoid prasinophyte sp. CCMP1205, prasinophyte sp. CCMP1205, prasinophyte sp. NIES-3671, prasinophyte sp. NIES-3671 (clade VIIA3), prasinophyte sp. RCC1019, prasinophyte sp. RCC1019 (clade VIIA3), prasinophyte sp. RCC1032, prasinophyte sp. RCC1032 (clade VIIA), prasinophyte sp. RCC1032 (clade VIIA3), prasinophyte sp. RCC1043, prasinophyte sp. RCC1043 (clade VIIA3), prasinophyte sp. RCC717, prasinophyte sp. RCC717 (clade VIIA2)
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