STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A3770_04p33440Methionine--tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family. (652 aa)    
Predicted Functional Partners:
A3770_03p24160
Methionine--tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family.
    
0.970
A3770_01p08790
Nucleic acid-binding protein.
 
  
 0.960
A3770_14p72560
Nucleic acid-binding protein.
 
  
 0.960
A3770_18p81980
Methionyl-tRNA formyltransferase.
     
 0.931
A3770_01p07160
Cobalamin-dependent methionine synthase.
   
 
 0.920
A3770_03p26550
Leucine--tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.900
A3770_20p86290
Leucine--tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.900
A3770_01p02550
N-acetyltransferase.
 
      0.899
A3770_02p17950
Arginine--tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.879
A3770_17p80630
Arginine--tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.879
Your Current Organism:
Chloropicon primus
NCBI taxonomy Id: 1764295
Other names: C. primus, Chlorophyta sp. CCMP1205, Chloropicon primus Lopes dos Santos & Eikrem, 2017, Coccoid green alga CCMP1205, Prasino-clade-7_X-A2 sp. RCC717, Prasino-clade-7_X-A3 sp. RCC1019, Prasino-clade-7_X-A3 sp. RCC1032, Prasino-clade-7_X-A3 sp. RCC1043, Prasinophyceae sp. CCMP1205, Prasinophyceae sp. RCC1019 (clade 7X-A3), Prasinophyceae sp. RCC1032 (clade 7X-A3), Prasinophyceae sp. RCC1032 (clade VIIA), Prasinophyceae sp. RCC1043 (clade 7X-A3), Prasinophyceae sp. RCC717 (clade 7X-A2), coccoid chlorophyte sp. CCMP1205, coccoid prasinophyte sp. CCMP1205, prasinophyte sp. CCMP1205, prasinophyte sp. NIES-3671, prasinophyte sp. NIES-3671 (clade VIIA3), prasinophyte sp. RCC1019, prasinophyte sp. RCC1019 (clade VIIA3), prasinophyte sp. RCC1032, prasinophyte sp. RCC1032 (clade VIIA), prasinophyte sp. RCC1032 (clade VIIA3), prasinophyte sp. RCC1043, prasinophyte sp. RCC1043 (clade VIIA3), prasinophyte sp. RCC717, prasinophyte sp. RCC717 (clade VIIA2)
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