A3770_11p64730 protein (Chloropicon primus) - STRING interaction network

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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Score

A3770_11p64730

Uncharacterized protein. (445 aa)

Predicted Functional Partners:

A3770_01p02780

0.865

A3770_06p42670

0.793

A3770_19p83950

0.793

A3770_06p40860

0.770

A3770_09p55130

0.753

A3770_01p07370

0.673

A3770_05p39950

0.632

A3770_01p00390

0.630

A3770_01p02180

0.630

A3770_02p18700

0.630

Your Current Organism:

Chloropicon primus

NCBI taxonomy Id: 1764295
Other names: C. primus, Chlorophyta sp. CCMP1205, Chloropicon primus Lopes dos Santos & Eikrem, 2017, Coccoid green alga CCMP1205, Prasino-clade-7_X-A2 sp. RCC717, Prasino-clade-7_X-A3 sp. RCC1019, Prasino-clade-7_X-A3 sp. RCC1032, Prasino-clade-7_X-A3 sp. RCC1043, Prasinophyceae sp. CCMP1205, Prasinophyceae sp. RCC1019 (clade 7X-A3), Prasinophyceae sp. RCC1032 (clade 7X-A3), Prasinophyceae sp. RCC1032 (clade VIIA), Prasinophyceae sp. RCC1043 (clade 7X-A3), Prasinophyceae sp. RCC717 (clade 7X-A2), coccoid chlorophyte sp. CCMP1205, coccoid prasinophyte sp. CCMP1205, prasinophyte sp. CCMP1205, prasinophyte sp. NIES-3671, prasinophyte sp. NIES-3671 (clade VIIA3), prasinophyte sp. RCC1019, prasinophyte sp. RCC1019 (clade VIIA3), prasinophyte sp. RCC1032, prasinophyte sp. RCC1032 (clade VIIA), prasinophyte sp. RCC1032 (clade VIIA3), prasinophyte sp. RCC1043, prasinophyte sp. RCC1043 (clade VIIA3), prasinophyte sp. RCC717, prasinophyte sp. RCC717 (clade VIIA2)

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A3770_01p00390	A3770_01p02780	A0A5B8MBP1	A0A5B8MEK3	Polyubiquitin.	S-phase kinase-associated protein 1; Belongs to the SKP1 family.	0.866
A3770_01p00390	A3770_01p07370	A0A5B8MBP1	A0A5B8MCS1	Polyubiquitin.	Polyubiquitin.	0.947
A3770_01p00390	A3770_06p40860	A0A5B8MBP1	A0A5B8MLP9	Polyubiquitin.	Ring-box protein.	0.824
A3770_01p00390	A3770_06p42670	A0A5B8MBP1	A0A5B8MMR5	Polyubiquitin.	Cullin; Belongs to the cullin family.	0.822
A3770_01p00390	A3770_09p55130	A0A5B8MBP1	A0A5B8MTL8	Polyubiquitin.	Skp1_POZ domain-containing protein; Belongs to the SKP1 family.	0.743
A3770_01p00390	A3770_11p64730	A0A5B8MBP1	A0A5B8MWD8	Polyubiquitin.	Uncharacterized protein.	0.630
A3770_01p00390	A3770_19p83950	A0A5B8MBP1	A0A5B8MZ19	Polyubiquitin.	Cullin; Belongs to the cullin family.	0.795
A3770_01p02180	A3770_01p02780	A0A5B8MED5	A0A5B8MEK3	Polyubiquitin.	S-phase kinase-associated protein 1; Belongs to the SKP1 family.	0.866
A3770_01p02180	A3770_01p07370	A0A5B8MED5	A0A5B8MCS1	Polyubiquitin.	Polyubiquitin.	0.945
A3770_01p02180	A3770_06p40860	A0A5B8MED5	A0A5B8MLP9	Polyubiquitin.	Ring-box protein.	0.824
A3770_01p02180	A3770_06p42670	A0A5B8MED5	A0A5B8MMR5	Polyubiquitin.	Cullin; Belongs to the cullin family.	0.822
A3770_01p02180	A3770_09p55130	A0A5B8MED5	A0A5B8MTL8	Polyubiquitin.	Skp1_POZ domain-containing protein; Belongs to the SKP1 family.	0.743
A3770_01p02180	A3770_11p64730	A0A5B8MED5	A0A5B8MWD8	Polyubiquitin.	Uncharacterized protein.	0.630
A3770_01p02180	A3770_19p83950	A0A5B8MED5	A0A5B8MZ19	Polyubiquitin.	Cullin; Belongs to the cullin family.	0.795
A3770_01p02780	A3770_01p00390	A0A5B8MEK3	A0A5B8MBP1	S-phase kinase-associated protein 1; Belongs to the SKP1 family.	Polyubiquitin.	0.866
A3770_01p02780	A3770_01p02180	A0A5B8MEK3	A0A5B8MED5	S-phase kinase-associated protein 1; Belongs to the SKP1 family.	Polyubiquitin.	0.866
A3770_01p02780	A3770_01p07370	A0A5B8MEK3	A0A5B8MCS1	S-phase kinase-associated protein 1; Belongs to the SKP1 family.	Polyubiquitin.	0.857
A3770_01p02780	A3770_02p18700	A0A5B8MEK3	A0A5B8MJ27	S-phase kinase-associated protein 1; Belongs to the SKP1 family.	Sde2 telomere and silencing domain-containing protein.	0.866
A3770_01p02780	A3770_05p39950	A0A5B8MEK3	A0A5B8MM00	S-phase kinase-associated protein 1; Belongs to the SKP1 family.	Phosphatidylinositolkinase.	0.866
A3770_01p02780	A3770_06p40860	A0A5B8MEK3	A0A5B8MLP9	S-phase kinase-associated protein 1; Belongs to the SKP1 family.	Ring-box protein.	0.997

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Network Stats

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Functional enrichments in your networkNote: some enrichments may be expected here (why?)
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Biological Process (Gene Ontology)

GO-term

description

count in network

strength

signal

false discovery rate

GO:0006351

Transcription, DNA-templated

5 of 25

1.89

2.34

7.95e-06

GO:0019336

Phenol-containing compound catabolic process

2 of 5

2.19

0.94

0.0181

GO:0006725

Cellular aromatic compound metabolic process

10 of 657

0.77

0.72

2.90e-05

GO:1901360

Organic cyclic compound metabolic process

10 of 697

0.74

0.68

4.13e-05

GO:2000142

Regulation of DNA-templated transcription, initiation

2 of 14

1.74

0.68

0.0489

(more ...)

Molecular Function (Gene Ontology)

GO-term

description

count in network

strength

signal

false discovery rate

GO:0003899

DNA-directed 5-3 RNA polymerase activity

3 of 7

2.22

1.54

0.0012

Cellular Component (Gene Ontology)

GO-term

description

count in network

strength

signal

false discovery rate

GO:0000428

DNA-directed RNA polymerase complex

3 of 7

2.22

1.89

0.00023

GO:0005737

Cytoplasm

9 of 1463

0.37

0.27

0.0392

Local Network Cluster (STRING)

cluster

description

count in network

strength

signal

false discovery rate

CL:987

Mixed, incl. Fumarylacetoacetase-like, C-terminal, and Glutathione S-transferase, N-terminal domain

4 of 5

2.49

2.93

2.79e-06

CL:1710

RNA polymerase

3 of 5

2.36

1.94

0.00022

KEGG Pathways

pathway

description

count in network

strength

signal

false discovery rate

map03020

RNA polymerase

3 of 4

2.46

2.38

3.32e-05

map00350

Tyrosine metabolism

4 of 20

1.89

2.1

3.32e-05

Subcellular Localization (COMPARTMENTS)

compartment

description

count in network

strength

signal

false discovery rate

GOCC:0000428

DNA-directed RNA polymerase complex

5 of 38

1.7

2.09

1.16e-05

GOCC:0005739

Mitochondrion

3 of 59

1.29

0.74

0.0201

GOCC:0005622

Intracellular

11 of 1640

0.41

0.34

0.0019

Annotated Keywords (UniProt)

keyword

description

count in network

strength

signal

false discovery rate

KW-0240

DNA-directed RNA polymerase

3 of 8

2.16

1.71

0.00051

KW-0548

Nucleotidyltransferase

3 of 38

1.48

0.91

0.0108

KW-0731

Sigma factor

2 of 12

1.81

0.8

0.0284

KW-0223

Dioxygenase

2 of 11

1.85

0.8

0.0284

KW-0804

Transcription

5 of 199

0.99

0.66

0.0108

Protein Domains (Pfam)

domain

description

count in network

strength

signal

false discovery rate

PF01557

Fumarylacetoacetate (FAA) hydrolase family

2 of 2

2.59

0.9

0.0235

PF02798

Glutathione S-transferase, N-terminal domain

2 of 3

2.41

0.89

0.0235

PF13410

Glutathione S-transferase, C-terminal domain

2 of 4

2.28

0.88

0.0235

PF04545

Sigma-70, region 4

2 of 8

1.98

0.73

0.0437

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