STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A3770_16p77260Long-chain-fatty-acid CoA ligase. (740 aa)    
Predicted Functional Partners:
A3770_06p41560
Acyl-[acyl-carrier-protein] hydrolase; Plays an essential role in chain termination during de novo fatty acid synthesis; Belongs to the acyl-ACP thioesterase family.
    
 0.946
A3770_01p02540
Triacylglycerol lipase.
  
 
 0.920
A3770_07p50040
Palmitoyl protein thioesterase.
     
 0.920
A3770_06p45220
AMP-dependent synthetase/ligase.
  
  
 
0.906
A3770_11p62000
Acetyl-CoA synthetase-like protein.
  
  
 
0.898
A3770_11p62010
Acetyl-CoA synthetase-like protein.
  
  
 
0.897
A3770_05p35630
SCP2 domain-containing protein.
  
 
 0.870
A3770_08p52660
MaoC-like domain-containing protein.
  
 
 0.762
A3770_18p80900
Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.
  
 0.762
A3770_01p07370
Polyubiquitin.
    
 0.731
Your Current Organism:
Chloropicon primus
NCBI taxonomy Id: 1764295
Other names: C. primus, Chlorophyta sp. CCMP1205, Chloropicon primus Lopes dos Santos & Eikrem, 2017, Coccoid green alga CCMP1205, Prasino-clade-7_X-A2 sp. RCC717, Prasino-clade-7_X-A3 sp. RCC1019, Prasino-clade-7_X-A3 sp. RCC1032, Prasino-clade-7_X-A3 sp. RCC1043, Prasinophyceae sp. CCMP1205, Prasinophyceae sp. RCC1019 (clade 7X-A3), Prasinophyceae sp. RCC1032 (clade 7X-A3), Prasinophyceae sp. RCC1032 (clade VIIA), Prasinophyceae sp. RCC1043 (clade 7X-A3), Prasinophyceae sp. RCC717 (clade 7X-A2), coccoid chlorophyte sp. CCMP1205, coccoid prasinophyte sp. CCMP1205, prasinophyte sp. CCMP1205, prasinophyte sp. NIES-3671, prasinophyte sp. NIES-3671 (clade VIIA3), prasinophyte sp. RCC1019, prasinophyte sp. RCC1019 (clade VIIA3), prasinophyte sp. RCC1032, prasinophyte sp. RCC1032 (clade VIIA), prasinophyte sp. RCC1032 (clade VIIA3), prasinophyte sp. RCC1043, prasinophyte sp. RCC1043 (clade VIIA3), prasinophyte sp. RCC717, prasinophyte sp. RCC717 (clade VIIA2)
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