A3770_18p81200 protein (Chloropicon primus) - STRING interaction network

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second shell of interactors

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Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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Score

A3770_18p81200

RCC1-like regulator of chromosome condensation protein. (1207 aa)

Predicted Functional Partners:

A3770_01p00380

0.702

A3770_09p56340

0.667

A3770_03p23110

0.639

A3770_12p67050

0.607

A3770_01p00390

0.606

A3770_01p02180

0.606

A3770_02p18700

0.606

A3770_05p39950

0.606

A3770_10p59040

0.606

A3770_03p23130

0.593

Your Current Organism:

Chloropicon primus

NCBI taxonomy Id: 1764295
Other names: C. primus, Chlorophyta sp. CCMP1205, Chloropicon primus Lopes dos Santos & Eikrem, 2017, Coccoid green alga CCMP1205, Prasino-clade-7_X-A2 sp. RCC717, Prasino-clade-7_X-A3 sp. RCC1019, Prasino-clade-7_X-A3 sp. RCC1032, Prasino-clade-7_X-A3 sp. RCC1043, Prasinophyceae sp. CCMP1205, Prasinophyceae sp. RCC1019 (clade 7X-A3), Prasinophyceae sp. RCC1032 (clade 7X-A3), Prasinophyceae sp. RCC1032 (clade VIIA), Prasinophyceae sp. RCC1043 (clade 7X-A3), Prasinophyceae sp. RCC717 (clade 7X-A2), coccoid chlorophyte sp. CCMP1205, coccoid prasinophyte sp. CCMP1205, prasinophyte sp. CCMP1205, prasinophyte sp. NIES-3671, prasinophyte sp. NIES-3671 (clade VIIA3), prasinophyte sp. RCC1019, prasinophyte sp. RCC1019 (clade VIIA3), prasinophyte sp. RCC1032, prasinophyte sp. RCC1032 (clade VIIA), prasinophyte sp. RCC1032 (clade VIIA3), prasinophyte sp. RCC1043, prasinophyte sp. RCC1043 (clade VIIA3), prasinophyte sp. RCC717, prasinophyte sp. RCC717 (clade VIIA2)

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A3770_01p00380	A3770_01p00390	A0A5B8MDU4	A0A5B8MBP1	Leucine-rich repeat domain-containing protein.	Polyubiquitin.	0.604
A3770_01p00380	A3770_01p02180	A0A5B8MDU4	A0A5B8MED5	Leucine-rich repeat domain-containing protein.	Polyubiquitin.	0.604
A3770_01p00380	A3770_02p18700	A0A5B8MDU4	A0A5B8MJ27	Leucine-rich repeat domain-containing protein.	Sde2 telomere and silencing domain-containing protein.	0.845
A3770_01p00380	A3770_03p23110	A0A5B8MDU4	A0A5B8MH87	Leucine-rich repeat domain-containing protein.	UV excision repair protein Rad23.	0.606
A3770_01p00380	A3770_03p23130	A0A5B8MDU4	A0A5B8MJE3	Leucine-rich repeat domain-containing protein.	Ubiquilin.	0.604
A3770_01p00380	A3770_05p39950	A0A5B8MDU4	A0A5B8MM00	Leucine-rich repeat domain-containing protein.	Phosphatidylinositolkinase.	0.608
A3770_01p00380	A3770_10p59040	A0A5B8MDU4	A0A5B8MSD7	Leucine-rich repeat domain-containing protein.	Uncharacterized protein.	0.604
A3770_01p00380	A3770_18p81200	A0A5B8MDU4	A0A5B8N0P2	Leucine-rich repeat domain-containing protein.	RCC1-like regulator of chromosome condensation protein.	0.702
A3770_01p00390	A3770_01p00380	A0A5B8MBP1	A0A5B8MDU4	Polyubiquitin.	Leucine-rich repeat domain-containing protein.	0.604
A3770_01p00390	A3770_03p23110	A0A5B8MBP1	A0A5B8MH87	Polyubiquitin.	UV excision repair protein Rad23.	0.860
A3770_01p00390	A3770_03p23130	A0A5B8MBP1	A0A5B8MJE3	Polyubiquitin.	Ubiquilin.	0.833
A3770_01p00390	A3770_09p56340	A0A5B8MBP1	A0A5B8MRL5	Polyubiquitin.	E3 ubiquitin-protein ligase.	0.938
A3770_01p00390	A3770_12p67050	A0A5B8MBP1	A0A5B8MV08	Polyubiquitin.	Ubiquitin-activating enzyme E1; Belongs to the ubiquitin-activating E1 family.	0.880
A3770_01p00390	A3770_18p81200	A0A5B8MBP1	A0A5B8N0P2	Polyubiquitin.	RCC1-like regulator of chromosome condensation protein.	0.606
A3770_01p02180	A3770_01p00380	A0A5B8MED5	A0A5B8MDU4	Polyubiquitin.	Leucine-rich repeat domain-containing protein.	0.604
A3770_01p02180	A3770_03p23110	A0A5B8MED5	A0A5B8MH87	Polyubiquitin.	UV excision repair protein Rad23.	0.860
A3770_01p02180	A3770_03p23130	A0A5B8MED5	A0A5B8MJE3	Polyubiquitin.	Ubiquilin.	0.833
A3770_01p02180	A3770_09p56340	A0A5B8MED5	A0A5B8MRL5	Polyubiquitin.	E3 ubiquitin-protein ligase.	0.938
A3770_01p02180	A3770_12p67050	A0A5B8MED5	A0A5B8MV08	Polyubiquitin.	Ubiquitin-activating enzyme E1; Belongs to the ubiquitin-activating E1 family.	0.880
A3770_01p02180	A3770_18p81200	A0A5B8MED5	A0A5B8N0P2	Polyubiquitin.	RCC1-like regulator of chromosome condensation protein.	0.606

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Network Stats

number of nodes:

11

number of edges:

21

average node degree:

3.82

avg. local clustering coefficient:

0.853

expected number of edges:

11

PPI enrichment p-value:

0.00482

your network has significantly more interactions
than expected (what does that mean?)

Functional enrichments in your networkNote: some enrichments may be expected here (why?)
disable highlight explain columns

Biological Process (Gene Ontology)

GO-term

description

count in network

strength

signal

false discovery rate

GO:0006817

Phosphate ion transport

6 of 6

2.42

4.61

6.26e-10

GO:0035435

Phosphate ion transmembrane transport

3 of 3

2.42

2.09

0.00012

GO:0006811

Ion transport

7 of 118

1.19

1.35

1.16e-05

GO:0006810

Transport

10 of 367

0.85

0.87

3.69e-06

GO:0055085

Transmembrane transport

7 of 287

0.81

0.61

0.0032

Molecular Function (Gene Ontology)

GO-term

description

count in network

strength

signal

false discovery rate

GO:0005315

Inorganic phosphate transmembrane transporter activity

3 of 3

2.42

1.76

0.00052

GO:0022804

Active transmembrane transporter activity

4 of 81

1.11

0.57

0.0417

Local Network Cluster (STRING)

cluster

description

count in network

strength

signal

false discovery rate

CL:2716

Phosphate ion transport

5 of 5

2.42

3.91

2.15e-08

CL:2685

Mixed, incl. Phosphate ion transport, and Ubiquinone metabolic process

7 of 22

1.92

3.72

9.40e-10

KEGG Pathways

pathway

description

count in network

strength

signal

false discovery rate

map02010

ABC transporters

7 of 93

1.3

1.65

1.61e-06

Annotated Keywords (UniProt)

keyword

description

count in network

strength

signal

false discovery rate

KW-0592

Phosphate transport

4 of 4

2.42

3.01

1.66e-06

KW-0813

Transport

5 of 109

1.08

0.82

0.0035

KW-0067

ATP-binding

6 of 228

0.84

0.6

0.0060

KW-1003

Cell membrane

4 of 130

0.91

0.48

0.0475

Protein Domains and Features (InterPro)

domain

description

count in network

strength

signal

false discovery rate

IPR003439

ABC transporter-like, ATP-binding domain

4 of 33

1.5

0.95

0.0086

IPR017911

MacB, ATP-binding domain

2 of 2

2.42

0.72

0.0483

Protein Domains (SMART)

domain

description

count in network

strength

signal

false discovery rate

SM00382

ATPases associated with a variety of cellular activities

4 of 82

1.11

0.65

0.0210

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