STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKQ99565.1MFS transporter. (441 aa)    
Predicted Functional Partners:
AKQ99564.1
Hypothetical protein.
       0.813
AKQ99566.1
Hypothetical protein; Belongs to the UPF0301 (AlgH) family.
       0.752
AKR02444.1
Membrane protein.
 
     0.677
eis
Enhanced intracellular survival protein; Effector that is released into the host cell and affects host immune responses. Acts as an acetyltransferase that acetylates lysine residues of host proteins.
   
  
 0.581
AKR01956.1
Integral membrane protein.
  
     0.577
AKQ99575.1
PadR family transcriptional regulator.
 
   
 0.569
AKR02446.1
Phosphatidylinositol mannoside acyltransferase.
  
   
 0.543
AKR02712.1
GCN5 family acetyltransferase.
  
     0.541
AKR02445.1
GDP-mannose-dependent alpha-(1-2)-phosphatidylinositol mannosyltransferase.
  
   
 0.516
AKR02753.1
Alanine rich lipoprotein LppW.
  
   
 0.504
Your Current Organism:
Mycobacterium tuberculosis variant bovis
NCBI taxonomy Id: 1765
Other names: ATCC 19210, CIP 105234, M. tuberculosis variant bovis, Mycobacterium bovis, Mycobacterium bovis subsp. bovis, Mycobacterium tuberculosis typus bovinus, Mycobacterium tuberculosis var. bovis, NCTC 10772
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.