STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKQ99605.1Glutamine ABC transporter permease. (349 aa)    
Predicted Functional Partners:
AKQ99606.1
Glutamine ABC transporter ATP-binding protein.
 
 
 0.989
AKR02394.1
Glutamine ABC transporter ATP-binding protein.
 
 
 0.917
AKR02780.1
long-chain-fatty-acid--AMP ligase FadD26.
  
  
 0.835
AKR00630.1
ABC transporter ATP-binding protein.
  
 
 0.801
AKR02792.1
Transmembrane transport protein MmpL7.
      
 0.792
AKQ99607.1
Hypothetical protein.
  
  
 0.790
AKR00840.1
Alanine and proline rich protein.
 
    0.647
AKQ99608.1
Hypothetical protein.
       0.604
AKQ99609.1
Aminotransferase.
     
 0.569
AKQ99604.1
Hypothetical protein.
       0.554
Your Current Organism:
Mycobacterium tuberculosis variant bovis
NCBI taxonomy Id: 1765
Other names: ATCC 19210, CIP 105234, M. tuberculosis variant bovis, Mycobacterium bovis, Mycobacterium bovis subsp. bovis, Mycobacterium tuberculosis typus bovinus, Mycobacterium tuberculosis var. bovis, NCTC 10772
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