STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKQ99658.1LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family. (314 aa)    
Predicted Functional Partners:
AKR01690.1
Transcriptional regulator.
   
  
 0.825
AKR03049.1
TetR family transcriptional regulator.
   
 
 0.773
AKR02064.1
LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
    0.765
AKQ99942.1
LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
    0.758
AKR00679.1
Transcriptional regulatory protein KdpE.
  
  
 0.758
AKR00295.1
Transcriptional regulator.
   
 
 0.753
AKR01395.1
Transcriptional regulator.
  
  
 0.747
AKR01393.1
Transcriptional regulator.
  
  
 0.743
AKQ99657.1
L,D-transpeptidase 1.
       0.738
AKR03165.1
Lactate dehydrogenase.
  
    0.732
Your Current Organism:
Mycobacterium tuberculosis variant bovis
NCBI taxonomy Id: 1765
Other names: ATCC 19210, CIP 105234, M. tuberculosis variant bovis, Mycobacterium bovis, Mycobacterium bovis subsp. bovis, Mycobacterium tuberculosis typus bovinus, Mycobacterium tuberculosis var. bovis, NCTC 10772
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