STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKQ99719.1Long-chain fatty acid--CoA ligase. (554 aa)    
Predicted Functional Partners:
AKQ99973.1
Polyketide synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
 
 0.968
AKR01383.1
Polyketide synthase.
 
 0.953
AKR02180.1
Polyketide synthase.
 
 0.938
AKR02177.1
Peptide synthetase.
 
0.929
AKQ99722.1
MCE-family protein Mce1A.
  
  
 0.911
AKQ99720.1
ABC transporter permease YrbE1A.
  
  
 0.877
AKR02782.1
Phenolpthiocerol synthesis type-I polyketide synthase PpsB.
 
 0.837
AKQ99724.1
MCE-family protein Mce1C.
  
    0.822
AKR01384.1
Polyketide synthase.
 
 0.814
AKR01382.1
Polyketide synthase.
 
 0.760
Your Current Organism:
Mycobacterium tuberculosis variant bovis
NCBI taxonomy Id: 1765
Other names: ATCC 19210, CIP 105234, M. tuberculosis variant bovis, Mycobacterium bovis, Mycobacterium bovis subsp. bovis, Mycobacterium tuberculosis typus bovinus, Mycobacterium tuberculosis var. bovis, NCTC 10772
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