STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKQ99821.1Allophanate hydrolase. (300 aa)    
Predicted Functional Partners:
AKQ99822.1
Allophanate hydrolase.
 
 0.999
AKQ99820.1
Aminoglycoside 2'-N-acetyltransferase.
  
  
 0.977
AKR00616.1
acetyl-/propionyl-CoA carboxylase subunit alpha.
 
  
 0.917
AKR02321.1
acetyl-/propionyl-CoA carboxylase subunit alpha.
 
  
 0.917
AKR03187.1
Biotin carboxyl carrier protein.
 
  
 0.917
AKR00952.1
Amidase; Belongs to the amidase family.
    
 0.904
AKR03291.1
Amidase; Belongs to the amidase family.
    
 0.901
AKR02824.1
Pyruvate carboxylase.
    
 0.899
AKR02873.1
glutamyl-tRNA(Gln) amidotransferase subunit A.
    
 0.868
AKR00939.1
Membrane protein.
  
  
 0.756
Your Current Organism:
Mycobacterium tuberculosis variant bovis
NCBI taxonomy Id: 1765
Other names: ATCC 19210, CIP 105234, M. tuberculosis variant bovis, Mycobacterium bovis, Mycobacterium bovis subsp. bovis, Mycobacterium tuberculosis typus bovinus, Mycobacterium tuberculosis var. bovis, NCTC 10772
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