STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKQ99849.1PPE family protein; Belongs to the mycobacterial PPE family. (513 aa)    
Predicted Functional Partners:
AKQ99848.1
Cell motility protein.
     
 0.950
AKQ99847.1
ESX-3 secretion system protein EccC3.
  
  
 0.935
AKQ99846.1
ESX-3 secretion system protein EccB3.
  
  
 0.933
AKQ99852.1
ESX-3 secretion-associated protein EspG3.
  
  
 0.922
AKQ99851.1
Antigen 7 EsxH; Belongs to the WXG100 family.
  
  
 0.896
AKQ99845.1
ESX-3 secretion system protein EccA3.
  
  
 0.879
AKQ99855.1
ESX-3 secretion system protein EccE3.
  
  
 0.876
AKQ99850.1
ESAT-6 like protein EsxG; Belongs to the WXG100 family.
  
  
 0.875
AKQ99853.1
ESX-3 secretion system protein EccD3.
  
  
 0.848
AKQ99854.1
Membrane-anchored mycosin MycP3.
  
  
 0.666
Your Current Organism:
Mycobacterium tuberculosis variant bovis
NCBI taxonomy Id: 1765
Other names: ATCC 19210, CIP 105234, M. tuberculosis variant bovis, Mycobacterium bovis, Mycobacterium bovis subsp. bovis, Mycobacterium tuberculosis typus bovinus, Mycobacterium tuberculosis var. bovis, NCTC 10772
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