STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKQ99895.1Dehydrogenase. (193 aa)    
Predicted Functional Partners:
AKQ99894.1
Dehydrogenase/reductase.
  
 0.995
AKQ99956.1
O-succinylhomoserine sulfhydrylase.
   
 0.915
AKR00743.1
Cystathionine gamma-synthase.
   
 0.915
AKR02190.1
Sulfite reductase; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
     
 0.905
AKR02134.1
O-acetylserine sulfhydrylase; Belongs to the cysteine synthase/cystathionine beta- synthase family.
     
 0.901
AKR03614.1
Lyase.
     
 0.901
AKQ99955.1
Sulfurtransferase.
     
 0.841
AKR00728.1
Sulfurtransferase.
     
 0.841
AKR02414.1
Glyoxalase II.
 
   
 0.768
AKQ99664.1
F420-dependent enzyme.
      
 0.761
Your Current Organism:
Mycobacterium tuberculosis variant bovis
NCBI taxonomy Id: 1765
Other names: ATCC 19210, CIP 105234, M. tuberculosis variant bovis, Mycobacterium bovis, Mycobacterium bovis subsp. bovis, Mycobacterium tuberculosis typus bovinus, Mycobacterium tuberculosis var. bovis, NCTC 10772
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