STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKR00053.1Iron-regulated heparin binding hemagglutinin HbhA. (199 aa)    
Predicted Functional Partners:
AKR03204.1
Phosphate-specific transport system accessory protein PhoU; Plays a role in the regulation of phosphate uptake.
      
 0.837
AKR00054.1
Transmembrane protein.
 
     0.816
AKR00055.1
Hypothetical protein.
     
 0.773
AKR00641.1
Transmembrane protein.
  
     0.773
AKQ99948.1
Hypothetical protein.
  
     0.772
AKR00782.1
Hypothetical protein.
  
     0.772
AKR00143.1
Membrane protein.
  
     0.771
AKR03799.1
Hypothetical protein.
  
     0.769
AKR00910.1
Anti-sigma factor RseA.
  
     0.768
AKR00434.1
Hypothetical protein.
  
     0.767
Your Current Organism:
Mycobacterium tuberculosis variant bovis
NCBI taxonomy Id: 1765
Other names: ATCC 19210, CIP 105234, M. tuberculosis variant bovis, Mycobacterium bovis, Mycobacterium bovis subsp. bovis, Mycobacterium tuberculosis typus bovinus, Mycobacterium tuberculosis var. bovis, NCTC 10772
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