STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKR00059.1Hypothetical protein. (174 aa)    
Predicted Functional Partners:
AKR00061.1
Lipoprotein LprQ.
 
     0.789
murB
UDP-N-acetylenolpyruvoylglucosamine reductase; Cell wall formation.
       0.788
AKR00782.1
Hypothetical protein.
  
     0.767
AKR00143.1
Membrane protein.
  
     0.766
AKR00641.1
Transmembrane protein.
  
     0.763
AKR00057.1
Membrane protein.
       0.759
AKR00058.1
Amidohydrolase.
       0.759
AKR03799.1
Hypothetical protein.
  
     0.749
AKR01865.1
Membrane protein.
  
     0.747
AKR02260.1
Membrane protein.
  
     0.747
Your Current Organism:
Mycobacterium tuberculosis variant bovis
NCBI taxonomy Id: 1765
Other names: ATCC 19210, CIP 105234, M. tuberculosis variant bovis, Mycobacterium bovis, Mycobacterium bovis subsp. bovis, Mycobacterium tuberculosis typus bovinus, Mycobacterium tuberculosis var. bovis, NCTC 10772
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.