STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKR00063.1Transcriptional regulator. (438 aa)    
Predicted Functional Partners:
AKR00062.1
Short-chain type oxidoreductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
    0.773
mshA
Glycosyltransferase MshA; Catalyzes the transfer of a N-acetyl-glucosamine moiety to 1D-myo-inositol 3-phosphate to produce 1D-myo-inositol 2-acetamido-2- deoxy-glucopyranoside 3-phosphate in the mycothiol biosynthesis pathway.
     
 0.723
AKR00065.1
Hypothetical protein.
       0.704
gpmA
Phosphoglycerate mutase Gpm1; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate.
  
  
 0.585
AKR00069.1
Two-component system sensor histidine kinase SenX3.
     
 0.566
AKR00070.1
Two-component system sensory transduction protein RegX3.
     
 0.539
AKQ99948.1
Hypothetical protein.
 
   
 0.536
AKR00727.1
Cysteine dioxygenase.
  
    0.487
AKR00248.1
Alpha-mannosidase.
  
  
 0.482
AKR00042.1
acyl-ACP thioesterase.
  
     0.466
Your Current Organism:
Mycobacterium tuberculosis variant bovis
NCBI taxonomy Id: 1765
Other names: ATCC 19210, CIP 105234, M. tuberculosis variant bovis, Mycobacterium bovis, Mycobacterium bovis subsp. bovis, Mycobacterium tuberculosis typus bovinus, Mycobacterium tuberculosis var. bovis, NCTC 10772
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