STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKR00069.1Two-component system sensor histidine kinase SenX3. (410 aa)    
Predicted Functional Partners:
AKR00070.1
Two-component system sensory transduction protein RegX3.
 0.999
AKR03146.1
DNA-binding response regulator MtrA.
 
 0.975
AKR00625.1
Response regulator MprA.
 
 0.967
AKR00534.1
Transcriptional regulator.
 
 0.957
AKR00371.1
Two component system response transcriptional positive regulator PhoP.
 
 0.923
AKR03698.1
Transcriptional regulator.
 
 0.922
AKR00686.1
Two component transcriptional regulator TrcR.
 
 0.897
AKR00195.1
Two-component system transcriptional regulator TcrA.
 
 0.896
AKR00679.1
Transcriptional regulatory protein KdpE.
 
 0.870
AKR02729.1
Transcriptional regulator.
 
 
 0.825
Your Current Organism:
Mycobacterium tuberculosis variant bovis
NCBI taxonomy Id: 1765
Other names: ATCC 19210, CIP 105234, M. tuberculosis variant bovis, Mycobacterium bovis, Mycobacterium bovis subsp. bovis, Mycobacterium tuberculosis typus bovinus, Mycobacterium tuberculosis var. bovis, NCTC 10772
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.