STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKR00148.1Oxidoreductase. (408 aa)    
Predicted Functional Partners:
AKR00147.1
Benzoquinone methyltransferase.
 
  
 0.773
AKR00149.1
Geranylgeranyl pyrophosphate synthase; Belongs to the FPP/GGPP synthase family.
 
 0.743
AKR00146.1
Hypothetical protein.
     
 0.734
htpX
Heat shock protein HtpX; Belongs to the peptidase M48B family.
       0.714
AKR02893.1
Electron transfer flavoprotein subunit beta.
  
 
 0.634
AKR00428.1
4-amino-4-deoxychorismate lyase.
      
 0.593
prcA
Proteasome subunit alpha; Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation. Belongs to the peptidase T1A family.
  
   
 0.578
AKR00344.1
anti-sigma-L factor RslA.
   
  
 0.562
AKQ99542.1
Penicillin-binding protein A.
      
 0.550
AKR02892.1
Electron transfer flavoprotein subunit alpha.
  
 
 0.549
Your Current Organism:
Mycobacterium tuberculosis variant bovis
NCBI taxonomy Id: 1765
Other names: ATCC 19210, CIP 105234, M. tuberculosis variant bovis, Mycobacterium bovis, Mycobacterium bovis subsp. bovis, Mycobacterium tuberculosis typus bovinus, Mycobacterium tuberculosis var. bovis, NCTC 10772
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