STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKR00186.1MCE-family protein Mce2F. (516 aa)    
Predicted Functional Partners:
AKR00178.1
ABC transporter permease YrbE2A.
 
 
 0.955
AKR00184.1
MCE-family lipoprotein LprL.
 
  
 0.947
AKR00179.1
ABC transporter permease YrbE2B.
 
 
 0.943
AKR00180.1
MCE-family protein Mce2A.
 
  
 0.906
AKR00185.1
MCE-family lipoprotein LprL.
  
  
 0.906
AKR00181.1
MCE-family protein Mce2B.
 
  
 0.897
AKQ99720.1
ABC transporter permease YrbE1A.
 
 
 0.893
AKR03419.1
ABC transporter permease.
 
 
 0.893
AKQ99721.1
ABC transporter permease YrbE1B.
 
 
 0.886
AKR03418.1
ABC transporter permease.
 
 
 0.886
Your Current Organism:
Mycobacterium tuberculosis variant bovis
NCBI taxonomy Id: 1765
Other names: ATCC 19210, CIP 105234, M. tuberculosis variant bovis, Mycobacterium bovis, Mycobacterium bovis subsp. bovis, Mycobacterium tuberculosis typus bovinus, Mycobacterium tuberculosis var. bovis, NCTC 10772
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