STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKR00277.1Hypothetical protein. (240 aa)    
Predicted Functional Partners:
AKR00276.1
enoyl-CoA hydratase.
     
 0.879
AKR00278.1
enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
     
 0.877
AKR00275.1
acyl-CoA dehydrogenase.
  
    0.869
nfo
Endonuclease; Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin.
       0.762
AKR03622.1
Methanol dehydrogenase transcriptional regulator MoxR2.
   
    0.687
AKR01514.1
Transcriptional regulator.
   
  
 0.679
AKR03165.1
Lactate dehydrogenase.
   
    0.676
AKR01453.1
Hypothetical protein.
   
  
 0.674
AKR03669.1
AraC family transcriptional regulator.
   
    0.673
AKQ99832.1
Transcriptional regulator.
  
    0.671
Your Current Organism:
Mycobacterium tuberculosis variant bovis
NCBI taxonomy Id: 1765
Other names: ATCC 19210, CIP 105234, M. tuberculosis variant bovis, Mycobacterium bovis, Mycobacterium bovis subsp. bovis, Mycobacterium tuberculosis typus bovinus, Mycobacterium tuberculosis var. bovis, NCTC 10772
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.