STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKR00356.1Hypothetical protein. (175 aa)    
Predicted Functional Partners:
AKR00357.1
PE-PGRS family protein.
       0.723
AKR02737.1
M23 peptidase domain-containing protein.
   
    0.670
AKR02649.1
Transposase.
   
    0.615
AKR03731.1
Arabinosyltransferase.
  
     0.602
AKR03729.1
Arabinosyltransferase.
  
     0.601
AKR03730.1
Arabinosyltransferase.
  
     0.597
AKR00355.1
3-hydroxyisobutyryl-CoA hydrolase.
       0.572
AKR03363.1
ESX-4 secretion system protein EccC4.
   
    0.567
AKR00215.1
Galactokinase.
   
    0.563
AKR00358.1
Hypothetical protein.
       0.520
Your Current Organism:
Mycobacterium tuberculosis variant bovis
NCBI taxonomy Id: 1765
Other names: ATCC 19210, CIP 105234, M. tuberculosis variant bovis, Mycobacterium bovis, Mycobacterium bovis subsp. bovis, Mycobacterium tuberculosis typus bovinus, Mycobacterium tuberculosis var. bovis, NCTC 10772
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.