STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKR00385.14-carboxymuconolactone decarboxylase. (144 aa)    
Predicted Functional Partners:
AKR00384.1
Oxidoreductase.
  
 0.987
AKR00378.1
Lanosterol 14-alpha demethylase; Belongs to the cytochrome P450 family.
 
  
 0.929
AKR00382.1
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
 
  
 0.902
purD
Phosphoribosylamine--glycine ligase; Belongs to the GARS family.
       0.866
AKR01240.1
Carboxymuconolactone decarboxylase.
     
 0.849
AKR00379.1
Oxidoreductase.
 
  
 0.847
AKR00383.1
Short-chain dehydrogenase.
 
  
 0.832
AKR00376.1
Hypothetical protein.
  
    0.781
AKR00380.1
Cytochrome P450.
 
  
 0.768
AKR00377.1
Ferredoxin.
 
    0.689
Your Current Organism:
Mycobacterium tuberculosis variant bovis
NCBI taxonomy Id: 1765
Other names: ATCC 19210, CIP 105234, M. tuberculosis variant bovis, Mycobacterium bovis, Mycobacterium bovis subsp. bovis, Mycobacterium tuberculosis typus bovinus, Mycobacterium tuberculosis var. bovis, NCTC 10772
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