STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKR00669.1TetR family transcriptional regulator. (197 aa)    
Predicted Functional Partners:
AKR00671.1
Nucleoside triphosphate pyrophosphohydrolase.
     
 0.887
AKR00670.1
Transcription-repair-coupling factor.
     
 0.865
AKR00833.1
Transcriptional regulator.
  
  
 0.783
AKR00668.1
Hypothetical protein.
       0.752
AKQ99566.1
Hypothetical protein; Belongs to the UPF0301 (AlgH) family.
   
    0.734
AKR01453.1
Hypothetical protein.
  
  
 0.731
AKR03070.1
XRE family transcriptional regulator.
  
    0.711
AKR03804.1
HTH-type transcriptional regulator EthR.
  
    0.708
AKR01739.1
LysR family transcriptional regulator.
   
 
 0.707
AKR02625.1
DtxR family transcriptional regulator.
  
  
 0.687
Your Current Organism:
Mycobacterium tuberculosis variant bovis
NCBI taxonomy Id: 1765
Other names: ATCC 19210, CIP 105234, M. tuberculosis variant bovis, Mycobacterium bovis, Mycobacterium bovis subsp. bovis, Mycobacterium tuberculosis typus bovinus, Mycobacterium tuberculosis var. bovis, NCTC 10772
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