STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKR00730.1PE-PGRS family protein. (763 aa)    
Predicted Functional Partners:
AKR01203.1
Hypothetical protein.
  
  
 0.717
AKR01204.1
Hypothetical protein.
    
 0.619
AKR02963.1
Alanine and valine rich protein.
    
 0.619
AKR01565.1
Vitamin B12 transport ATP-binding protein BacA.
     
 0.601
AKR02577.1
Hypothetical protein.
  
  
 0.597
AKR00731.1
Hypothetical protein.
       0.549
AKR00255.1
Carotenoid cleavage oxygenase.
    
  0.545
AKR00547.1
Dioxygenase.
    
  0.545
AKQ99988.1
Lipoprotein aminopeptidase LpqL.
    
 0.542
AKR01510.1
Peptidase M28.
    
 0.542
Your Current Organism:
Mycobacterium tuberculosis variant bovis
NCBI taxonomy Id: 1765
Other names: ATCC 19210, CIP 105234, M. tuberculosis variant bovis, Mycobacterium bovis, Mycobacterium bovis subsp. bovis, Mycobacterium tuberculosis typus bovinus, Mycobacterium tuberculosis var. bovis, NCTC 10772
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.