STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKR00793.1Hypothetical protein. (49 aa)    
Predicted Functional Partners:
AKR00794.1
Hypothetical protein.
       0.877
AKR00792.1
Guanylate cyclase.
  
   0.741
AKR00795.1
Hypothetical protein.
       0.566
zwf
Glucose-6-phosphate 1-dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone.
  
    0.530
AKR00797.1
6-phosphogluconate dehydrogenase.
       0.494
AKQ99606.1
Glutamine ABC transporter ATP-binding protein.
  
 0.458
AKR02244.1
Transmembrane protein.
  
 0.458
AKR02394.1
Glutamine ABC transporter ATP-binding protein.
  
 0.458
AKR02395.1
NTE family protein.
  
 0.457
AKR00646.1
Acetyltransferase.
  
 0.438
Your Current Organism:
Mycobacterium tuberculosis variant bovis
NCBI taxonomy Id: 1765
Other names: ATCC 19210, CIP 105234, M. tuberculosis variant bovis, Mycobacterium bovis, Mycobacterium bovis subsp. bovis, Mycobacterium tuberculosis typus bovinus, Mycobacterium tuberculosis var. bovis, NCTC 10772
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