STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKR00870.1Transcriptional regulator. (538 aa)    
Predicted Functional Partners:
AKR00872.1
Proline dehydrogenase.
 
   
 0.870
AKR00871.1
Pyrroline-5-carboxylate dehydrogenase RocA.
 
   
 0.828
AKR03834.1
ESX-1 secretion system protein EccE1.
  
     0.588
AKR03000.1
Transcriptional regulator.
  
    0.565
AKR02290.1
Hypothetical protein.
  
     0.539
AKR01065.1
Membrane protein.
  
     0.530
AKR00958.1
Transcriptional regulator EmbR.
  
    0.508
AKR02466.1
Hypothetical protein.
  
     0.507
AKR01489.1
GDP-mannose-dependent alpha-(1-6)-phosphatidylinositol dimannoside mannosyltransferase.
  
     0.493
AKR03762.1
Acyltransferase.
  
     0.491
Your Current Organism:
Mycobacterium tuberculosis variant bovis
NCBI taxonomy Id: 1765
Other names: ATCC 19210, CIP 105234, M. tuberculosis variant bovis, Mycobacterium bovis, Mycobacterium bovis subsp. bovis, Mycobacterium tuberculosis typus bovinus, Mycobacterium tuberculosis var. bovis, NCTC 10772
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.