STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKR00936.1Toxin RelE. (97 aa)    
Predicted Functional Partners:
AKR00937.1
Antitoxin RelB; Antitoxin component of a type II toxin-antitoxin (TA) system.
 
 
 
 0.990
AKR02709.1
Antitoxin RelF; Antitoxin component of a type II toxin-antitoxin (TA) system.
 
 
 
 0.915
AKR03274.1
Antitoxin RelJ; Antitoxin component of a type II toxin-antitoxin (TA) system.
   
 
 0.703
AKR03275.1
Toxin RelK.
     
 0.666
AKR00935.1
Short-chain type dehydrogenase/reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
       0.648
AKR01715.1
Toxin.
     
 0.577
AKR00938.1
Multifunctional 2-oxoglutarate metabolism enzyme.
       0.563
AKR00110.1
Cytochrome C biogenesis protein ResC.
      
 0.546
AKR00297.1
Mycofactocin system protein MftB.
  
     0.401
Your Current Organism:
Mycobacterium tuberculosis variant bovis
NCBI taxonomy Id: 1765
Other names: ATCC 19210, CIP 105234, M. tuberculosis variant bovis, Mycobacterium bovis, Mycobacterium bovis subsp. bovis, Mycobacterium tuberculosis typus bovinus, Mycobacterium tuberculosis var. bovis, NCTC 10772
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.