STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKR01182.1acyl-CoA dehydrogenase. (609 aa)    
Predicted Functional Partners:
AKR02892.1
Electron transfer flavoprotein subunit alpha.
 
 0.794
AKR00486.1
3-hydroxyacyl-CoA dehydrogenase.
  
 0.745
AKR00065.1
Hypothetical protein.
  
     0.743
AKR02893.1
Electron transfer flavoprotein subunit beta.
 
 
 0.697
AKR01187.1
enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.685
AKR01183.1
PE-PGRS family protein.
       0.665
AKR00614.1
enoyl-CoA hydratase.
 
 0.635
AKR00734.1
3-hydroxyisobutyryl-CoA hydrolase.
  
 0.629
nuoI
NADH-quinone oxidoreductase subunit I; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.
  
 0.621
AKR03609.1
Anion transporter ATPase.
  
    0.612
Your Current Organism:
Mycobacterium tuberculosis variant bovis
NCBI taxonomy Id: 1765
Other names: ATCC 19210, CIP 105234, M. tuberculosis variant bovis, Mycobacterium bovis, Mycobacterium bovis subsp. bovis, Mycobacterium tuberculosis typus bovinus, Mycobacterium tuberculosis var. bovis, NCTC 10772
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