STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKR01184.1Cobalt/nickel-exporting P-type ATPase. (657 aa)    
Predicted Functional Partners:
AKR01185.1
Thioredoxin.
  
  
 0.718
AKQ99875.1
Hypothetical protein.
  
 
 0.699
AKR01187.1
enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
  
 0.693
AKR00518.1
Hypothetical protein.
  
    0.672
AKR01186.1
Thioredoxin; Belongs to the thioredoxin family.
  
  
 0.666
AKR01183.1
PE-PGRS family protein.
     
 0.559
AKR00004.1
Periplasmic superoxide dismutase [Cu-Zn] SodC; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the Cu-Zn superoxide dismutase family.
    
 0.527
AKR00472.1
Oxidase.
 
  
 0.504
AKR01188.1
Macrolide ABC transporter ATP-binding protein.
       0.489
AKR03676.1
HTH-type transcriptional regulator NmtR.
 
  
 0.475
Your Current Organism:
Mycobacterium tuberculosis variant bovis
NCBI taxonomy Id: 1765
Other names: ATCC 19210, CIP 105234, M. tuberculosis variant bovis, Mycobacterium bovis, Mycobacterium bovis subsp. bovis, Mycobacterium tuberculosis typus bovinus, Mycobacterium tuberculosis var. bovis, NCTC 10772
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