STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKR01190.1Transcriptional regulator. (187 aa)    
Predicted Functional Partners:
AKR01191.1
Aconitate hydratase.
  
    0.887
AKR02577.1
Hypothetical protein.
 
    0.707
AKR01955.1
Hypothetical protein.
  
     0.672
AKR00588.1
Intracellular chorismate mutase.
  
    0.660
AKR01358.1
Hypothetical protein.
  
     0.658
AKR01043.1
Lipoprotein LprD.
  
     0.640
AKR01192.1
Membrane protein.
       0.616
AKR00277.1
Hypothetical protein.
   
    0.564
AKR02260.1
Membrane protein.
  
     0.559
AKR02525.1
Membrane protein.
  
     0.533
Your Current Organism:
Mycobacterium tuberculosis variant bovis
NCBI taxonomy Id: 1765
Other names: ATCC 19210, CIP 105234, M. tuberculosis variant bovis, Mycobacterium bovis, Mycobacterium bovis subsp. bovis, Mycobacterium tuberculosis typus bovinus, Mycobacterium tuberculosis var. bovis, NCTC 10772
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