STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
frdCFumarate reductase FrdC; Seems to be involved in the anchoring of the catalytic components of the fumarate reductase complex to the cytoplasmic membrane. (126 aa)    
Predicted Functional Partners:
frdD
Fumarate reductase FrdD; Seems to be involved in the anchoring of the catalytic components of the fumarate reductase complex to the cytoplasmic membrane.
 
 0.999
AKR01263.1
Fumarate reductase FrdB.
 
 
 0.997
AKR01262.1
Fumarate reductase FrdA.
 
 
 0.995
AKR01261.1
Fumarate reductase.
       0.833
AKQ99804.1
Fumarate reductase.
  
 
 0.781
AKR03224.1
Succinate dehydrogenase iron-sulfur subunit.
  
 
 0.781
AKR01251.1
Lipoprotein LprI.
  
     0.689
AKR03223.1
Succinate dehydrogenase flavoprotein subunit.
  
 
 0.689
AKQ99805.1
Succinate dehydrogenase flavoprotein subunit.
  
 
 0.673
AKR01563.1
Flavoprotein.
  
 
 0.667
Your Current Organism:
Mycobacterium tuberculosis variant bovis
NCBI taxonomy Id: 1765
Other names: ATCC 19210, CIP 105234, M. tuberculosis variant bovis, Mycobacterium bovis, Mycobacterium bovis subsp. bovis, Mycobacterium tuberculosis typus bovinus, Mycobacterium tuberculosis var. bovis, NCTC 10772
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