STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKR01266.1Regulatory protein. (202 aa)    
Predicted Functional Partners:
AKR03768.1
TetR family transcriptional regulator.
  
  
 0.795
AKR00024.1
Transcriptional regulator.
  
    0.772
AKR03049.1
TetR family transcriptional regulator.
  
   
0.762
AKR00295.1
Transcriptional regulator.
  
  
 0.744
AKR00851.1
Transcriptional regulator.
  
   
0.741
AKR02923.1
TetR family transcriptional regulator.
  
    0.740
cobB
NAD-dependent deacetylase; Belongs to the sirtuin family. Class III subfamily.
   
  
 0.734
AKR02064.1
LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
   
 
 0.714
AKR00873.1
ECF RNA polymerase sigma factor SigI; Belongs to the sigma-70 factor family.
  
  
 0.712
AKR01690.1
Transcriptional regulator.
  
    0.711
Your Current Organism:
Mycobacterium tuberculosis variant bovis
NCBI taxonomy Id: 1765
Other names: ATCC 19210, CIP 105234, M. tuberculosis variant bovis, Mycobacterium bovis, Mycobacterium bovis subsp. bovis, Mycobacterium tuberculosis typus bovinus, Mycobacterium tuberculosis var. bovis, NCTC 10772
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.