STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKR01516.1Hypothetical protein. (272 aa)    
Predicted Functional Partners:
AKR01515.1
Oxidoreductase.
   
 0.988
AKR01514.1
Transcriptional regulator.
 
     0.804
AKR03857.1
Alanine and proline rich protein.
  
     0.768
AKR01696.1
Oxygenase.
  
     0.710
AKR01887.1
Integral membrane protein.
  
     0.707
AKR03724.1
Nucleoside diphosphate kinase regulator.
  
     0.624
AKR02594.1
Type I restriction/modification system specificity determinant HsdS.
  
     0.614
AKR01724.1
Transcriptional regulator.
  
     0.612
AKR02948.1
Hydrolase.
  
     0.565
AKR00674.1
Membrane protein.
  
     0.560
Your Current Organism:
Mycobacterium tuberculosis variant bovis
NCBI taxonomy Id: 1765
Other names: ATCC 19210, CIP 105234, M. tuberculosis variant bovis, Mycobacterium bovis, Mycobacterium bovis subsp. bovis, Mycobacterium tuberculosis typus bovinus, Mycobacterium tuberculosis var. bovis, NCTC 10772
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.