STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKR01614.1acyl-CoA transferase; Belongs to the CoA-transferase III family. (804 aa)    
Predicted Functional Partners:
AKR01696.1
Oxygenase.
   
 
 0.639
AKR00486.1
3-hydroxyacyl-CoA dehydrogenase.
  
 
 0.619
AKR01611.1
Abortive infection protein.
 
     0.610
AKR01616.1
acetyl-CoA acetyltransferase.
  
  
 0.604
AKR02348.1
Fatty acid synthase.
  
 0.592
AKR01441.1
3-hydroxybutyryl-CoA dehydrogenase FadB.
     
 0.581
AKR01612.1
Hypothetical protein.
       0.546
AKR01613.1
Short-chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
       0.546
AKR01617.1
Hypothetical protein.
       0.544
AKQ99659.1
oxalyl-CoA decarboxylase.
 
 
 0.512
Your Current Organism:
Mycobacterium tuberculosis variant bovis
NCBI taxonomy Id: 1765
Other names: ATCC 19210, CIP 105234, M. tuberculosis variant bovis, Mycobacterium bovis, Mycobacterium bovis subsp. bovis, Mycobacterium tuberculosis typus bovinus, Mycobacterium tuberculosis var. bovis, NCTC 10772
Server load: low (14%) [HD]