STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKR01616.1acetyl-CoA acetyltransferase. (494 aa)    
Predicted Functional Partners:
AKR00486.1
3-hydroxyacyl-CoA dehydrogenase.
  
 0.993
AKR03434.1
enoyl-CoA hydratase.
 
 0.970
AKR00278.1
enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 0.969
AKR00733.1
enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 0.968
AKR03595.1
Acetyl-coenzyme A synthetase.
  
 
 0.961
AKR00044.1
3-hydroxybutyryl-CoA dehydrogenase.
  
 0.960
AKR01441.1
3-hydroxybutyryl-CoA dehydrogenase FadB.
  
 0.960
glcB
Malate synthase G; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily.
   
 
 0.940
AKR00366.1
Methylmalonate-semialdehyde dehydrogenase.
   
 0.937
AKR02323.1
Putative succinyl-CoA:3-ketoacid coenzyme A transferase subunit B.
  
 
 0.926
Your Current Organism:
Mycobacterium tuberculosis variant bovis
NCBI taxonomy Id: 1765
Other names: ATCC 19210, CIP 105234, M. tuberculosis variant bovis, Mycobacterium bovis, Mycobacterium bovis subsp. bovis, Mycobacterium tuberculosis typus bovinus, Mycobacterium tuberculosis var. bovis, NCTC 10772
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