STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKR01741.1Chitinase. (142 aa)    
Predicted Functional Partners:
AKR01863.1
Dipeptidase; Belongs to the peptidase M24B family.
      
 0.836
AKQ99878.1
Beta-1,3-glucanase.
 
   
 0.650
AKR00100.1
Hypothetical protein.
 
 
 0.625
AKR01583.1
Hypothetical protein.
  
     0.616
murB
UDP-N-acetylenolpyruvoylglucosamine reductase; Cell wall formation.
      
 0.543
AKQ99853.1
ESX-3 secretion system protein EccD3.
  
     0.537
AKR02989.1
Phosphatase.
  
     0.500
AKR02753.1
Alanine rich lipoprotein LppW.
  
     0.494
lysA
Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine.
      
 0.487
AKR00748.1
Hypothetical protein.
  
 
 0.485
Your Current Organism:
Mycobacterium tuberculosis variant bovis
NCBI taxonomy Id: 1765
Other names: ATCC 19210, CIP 105234, M. tuberculosis variant bovis, Mycobacterium bovis, Mycobacterium bovis subsp. bovis, Mycobacterium tuberculosis typus bovinus, Mycobacterium tuberculosis var. bovis, NCTC 10772
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