STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKR01786.1Hypothetical protein. (201 aa)    
Predicted Functional Partners:
AKR01785.1
Transcriptional regulator.
   
 0.982
AKR03070.1
XRE family transcriptional regulator.
 
   
 0.855
AKR01787.1
Hypothetical protein.
       0.711
AKR01784.1
Hypothetical protein.
       0.559
AKR01715.1
Toxin.
      
 0.556
AKR00775.1
Antitoxin MazE3.
      
 0.546
AKR01716.1
Antitoxin HigA.
 
   
 0.500
AKR00475.1
MFS transporter.
  
     0.448
AKR01788.1
Hypothetical protein.
       0.432
AKR01789.1
Hypothetical protein.
       0.432
Your Current Organism:
Mycobacterium tuberculosis variant bovis
NCBI taxonomy Id: 1765
Other names: ATCC 19210, CIP 105234, M. tuberculosis variant bovis, Mycobacterium bovis, Mycobacterium bovis subsp. bovis, Mycobacterium tuberculosis typus bovinus, Mycobacterium tuberculosis var. bovis, NCTC 10772
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.