STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKR01964.1long-chain-fatty-acid--CoA ligase FadD15. (508 aa)    
Predicted Functional Partners:
AKR01963.1
Hypothetical protein.
     0.990
AKR02348.1
Fatty acid synthase.
  
 0.952
AKQ99770.1
long-chain-fatty-acid--CoA ligase.
 
0.927
AKR01259.1
AMP-dependent synthetase.
  
  
 
0.919
AKR02446.1
Phosphatidylinositol mannoside acyltransferase.
     
 0.838
AKR02970.1
PE-PGRS family protein, triacylglycerol lipase LipY.
  
 
 0.808
gmk
Guanylate kinase; Essential for recycling GMP and indirectly, cGMP.
    
  0.635
AKR01962.1
Hypothetical protein.
       0.569
AKQ99534.1
Iron-regulated peptidyl-prolyl-cis-trans-isomerase A ppiA; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
  
 
 0.564
AKR03192.1
L-lysine-epsilon aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
     
 0.558
Your Current Organism:
Mycobacterium tuberculosis variant bovis
NCBI taxonomy Id: 1765
Other names: ATCC 19210, CIP 105234, M. tuberculosis variant bovis, Mycobacterium bovis, Mycobacterium bovis subsp. bovis, Mycobacterium tuberculosis typus bovinus, Mycobacterium tuberculosis var. bovis, NCTC 10772
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