STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKR01967.1Endopeptidase. (385 aa)    
Predicted Functional Partners:
AKQ99884.1
Exported protein NLP/P60 family member.
 
  
 0.894
AKR01966.1
Hypothetical protein.
  
  
 0.778
AKR00590.1
Hypothetical protein.
 
  
 0.690
AKR01456.1
Glycoside hydrolase.
 
     0.682
AKR01965.1
GDP-mannose-dependent alpha-(1-6)-phosphatidylinositol monomannoside mannosyltransferase.
     
 0.633
AKR03773.1
Membrane protein.
  
    0.631
AKR03864.1
Hypothetical protein.
  
     0.624
rsmA
Ribosomal RNA small subunit methyltransferase A; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits.
  
    0.575
AKR01194.1
Peptidoglycan endopeptidase RipB.
 
  
0.572
AKQ99728.1
MCE-associated membrane protein.
   
    0.564
Your Current Organism:
Mycobacterium tuberculosis variant bovis
NCBI taxonomy Id: 1765
Other names: ATCC 19210, CIP 105234, M. tuberculosis variant bovis, Mycobacterium bovis, Mycobacterium bovis subsp. bovis, Mycobacterium tuberculosis typus bovinus, Mycobacterium tuberculosis var. bovis, NCTC 10772
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.