STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKR02116.1Universal stress protein. (292 aa)    
Predicted Functional Partners:
AKR02117.1
Amino acid permease.
 
  
 0.972
AKR02120.1
N-dimethylarginine dimethylaminohydrolase.
  
  
 0.931
AKR02118.1
Ornithine aminotransferase.
  
  
 0.808
AKR02119.1
Ornithine aminotransferase.
  
  
 0.808
AKQ99577.1
Hypothetical protein.
     
 0.753
AKR02121.1
AsnC family transcriptional regulator.
     
 0.618
AKQ99858.1
Sulfotransferase; Catalyzes the sulfuryl group transfer from 3'- phosphoadenosine-5'-phosphosulfate (PAPS) to trehalose, leading to trehalose-2-sulfate (T2S).
  
     0.559
AKR01800.1
Alpha-crystallin; Belongs to the small heat shock protein (HSP20) family.
  
 
 0.540
AKR00646.1
Acetyltransferase.
  
  
 0.538
AKR02124.1
MarR family transcriptional regulator.
 
  
 0.523
Your Current Organism:
Mycobacterium tuberculosis variant bovis
NCBI taxonomy Id: 1765
Other names: ATCC 19210, CIP 105234, M. tuberculosis variant bovis, Mycobacterium bovis, Mycobacterium bovis subsp. bovis, Mycobacterium tuberculosis typus bovinus, Mycobacterium tuberculosis var. bovis, NCTC 10772
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