STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKR02215.1Hypothetical protein. (325 aa)    
Predicted Functional Partners:
AKR02216.1
Hypothetical protein.
  
 0.995
AKR02214.1
Hypothetical protein.
  
 0.994
AKR02400.1
Hypothetical protein.
  
 0.841
AKR02398.1
Hypothetical protein.
 
  
0.707
rpsT
30S ribosomal protein S20; Binds directly to 16S ribosomal RNA.
       0.639
AKR02396.1
Transglutaminase.
 
  
 0.583
AKR02397.1
Transglutaminase.
  
  
 0.486
AKR01392.1
Transglutaminase.
 
  
 0.426
Your Current Organism:
Mycobacterium tuberculosis variant bovis
NCBI taxonomy Id: 1765
Other names: ATCC 19210, CIP 105234, M. tuberculosis variant bovis, Mycobacterium bovis, Mycobacterium bovis subsp. bovis, Mycobacterium tuberculosis typus bovinus, Mycobacterium tuberculosis var. bovis, NCTC 10772
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.