STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKR02326.1TetR family transcriptional regulator. (215 aa)    
Predicted Functional Partners:
AKR02318.1
Citrate lyase subunit beta; Belongs to the HpcH/HpaI aldolase family.
 
   
 0.818
AKR02321.1
acetyl-/propionyl-CoA carboxylase subunit alpha.
 
 
 
 0.797
AKR02319.1
MaoC family dehydratase.
 
   
 0.796
AKR02322.1
acetyl-/propionyl-CoA carboxylase subunit beta.
 
   
 0.791
AKR02324.1
Putative succinyl-CoA:3-ketoacid coenzyme A transferase subunit A.
     
 0.790
AKR02320.1
acyl-CoA dehydrogenase.
 
   
 0.773
AKQ99903.1
Transcriptional regulator.
  
    0.712
AKQ99795.1
TetR family transcriptional regulator.
  
  
 0.696
AKR02325.1
AMP-binding protein.
     
 0.679
AKR02314.1
Branched-chain alpha-keto acid dehydrogenase subunit E2.
     
 0.662
Your Current Organism:
Mycobacterium tuberculosis variant bovis
NCBI taxonomy Id: 1765
Other names: ATCC 19210, CIP 105234, M. tuberculosis variant bovis, Mycobacterium bovis, Mycobacterium bovis subsp. bovis, Mycobacterium tuberculosis typus bovinus, Mycobacterium tuberculosis var. bovis, NCTC 10772
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.