STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKR02344.1Membrane protein. (75 aa)    
Predicted Functional Partners:
AKR02345.1
Peroxiredoxin.
       0.777
AKR03214.1
Hypothetical protein.
  
     0.774
AKR00782.1
Hypothetical protein.
  
     0.772
AKR00910.1
Anti-sigma factor RseA.
  
     0.772
AKR00896.1
Cell division protein DivIVA.
  
     0.770
AKR02866.1
Low molecular weight protein antigen 6.
  
     0.769
AKR03108.1
Hypothetical protein.
  
     0.769
AKR02875.1
Hypothetical protein.
  
    0.767
AKR01865.1
Membrane protein.
  
     0.764
AKR02283.1
Hypothetical protein.
  
     0.760
Your Current Organism:
Mycobacterium tuberculosis variant bovis
NCBI taxonomy Id: 1765
Other names: ATCC 19210, CIP 105234, M. tuberculosis variant bovis, Mycobacterium bovis, Mycobacterium bovis subsp. bovis, Mycobacterium tuberculosis typus bovinus, Mycobacterium tuberculosis var. bovis, NCTC 10772
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.