Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AKR01332.1 | AKR02382.1 | Mb1595_p1809 | Mb1595_p2859 | Pyruvate kinase; Belongs to the pyruvate kinase family. | Shikimate 5-dehydrogenase; Belongs to the shikimate dehydrogenase family. | 0.429 |
AKR01332.1 | aroK | Mb1595_p1809 | Mb1595_p2843 | Pyruvate kinase; Belongs to the pyruvate kinase family. | Shikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family. | 0.643 |
AKR01332.1 | trpA | Mb1595_p1809 | Mb1595_p1803 | Pyruvate kinase; Belongs to the pyruvate kinase family. | Tryptophan synthase subunit alpha; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family. | 0.549 |
AKR02367.1 | AKR02382.1 | Mb1595_p2844 | Mb1595_p2859 | Chorismate synthase. | Shikimate 5-dehydrogenase; Belongs to the shikimate dehydrogenase family. | 0.972 |
AKR02367.1 | AKR03687.1 | Mb1595_p2844 | Mb1595_p4164 | Chorismate synthase. | Prephenate dehydrogenase. | 0.917 |
AKR02367.1 | aroA | Mb1595_p2844 | Mb1595_p3604 | Chorismate synthase. | 3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | 0.997 |
AKR02367.1 | aroB | Mb1595_p2844 | Mb1595_p2842 | Chorismate synthase. | 3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ). | 0.998 |
AKR02367.1 | aroK | Mb1595_p2844 | Mb1595_p2843 | Chorismate synthase. | Shikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family. | 0.991 |
AKR02367.1 | aroQ | Mb1595_p2844 | Mb1595_p2841 | Chorismate synthase. | 3-dehydroquinate dehydratase; Catalyzes a trans-dehydration via an enolate intermediate. Belongs to the type-II 3-dehydroquinase family. | 0.939 |
AKR02367.1 | mltG | Mb1595_p2844 | Mb1595_p2860 | Chorismate synthase. | Membrane protein; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. Belongs to the transglycosylase MltG family. | 0.602 |
AKR02367.1 | pheA | Mb1595_p2844 | Mb1595_p4254 | Chorismate synthase. | Prephenate dehydratase. | 0.717 |
AKR02367.1 | trpA | Mb1595_p2844 | Mb1595_p1803 | Chorismate synthase. | Tryptophan synthase subunit alpha; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family. | 0.845 |
AKR02382.1 | AKR01332.1 | Mb1595_p2859 | Mb1595_p1809 | Shikimate 5-dehydrogenase; Belongs to the shikimate dehydrogenase family. | Pyruvate kinase; Belongs to the pyruvate kinase family. | 0.429 |
AKR02382.1 | AKR02367.1 | Mb1595_p2859 | Mb1595_p2844 | Shikimate 5-dehydrogenase; Belongs to the shikimate dehydrogenase family. | Chorismate synthase. | 0.972 |
AKR02382.1 | aroA | Mb1595_p2859 | Mb1595_p3604 | Shikimate 5-dehydrogenase; Belongs to the shikimate dehydrogenase family. | 3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | 0.995 |
AKR02382.1 | aroB | Mb1595_p2859 | Mb1595_p2842 | Shikimate 5-dehydrogenase; Belongs to the shikimate dehydrogenase family. | 3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ). | 0.997 |
AKR02382.1 | aroK | Mb1595_p2859 | Mb1595_p2843 | Shikimate 5-dehydrogenase; Belongs to the shikimate dehydrogenase family. | Shikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family. | 0.999 |
AKR02382.1 | aroQ | Mb1595_p2859 | Mb1595_p2841 | Shikimate 5-dehydrogenase; Belongs to the shikimate dehydrogenase family. | 3-dehydroquinate dehydratase; Catalyzes a trans-dehydration via an enolate intermediate. Belongs to the type-II 3-dehydroquinase family. | 0.984 |
AKR02382.1 | mltG | Mb1595_p2859 | Mb1595_p2860 | Shikimate 5-dehydrogenase; Belongs to the shikimate dehydrogenase family. | Membrane protein; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. Belongs to the transglycosylase MltG family. | 0.945 |
AKR02382.1 | pheA | Mb1595_p2859 | Mb1595_p4254 | Shikimate 5-dehydrogenase; Belongs to the shikimate dehydrogenase family. | Prephenate dehydratase. | 0.694 |
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