STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dhaAHaloalkane dehalogenase; Catalyzes hydrolytic cleavage of carbon-halogen bonds in halogenated aliphatic compounds, leading to the formation of the corresponding primary alcohols, halide ions and protons. (300 aa)    
Predicted Functional Partners:
dhmA
Haloalkane dehalogenase; Catalyzes hydrolytic cleavage of carbon-halogen bonds in halogenated aliphatic compounds, leading to the formation of the corresponding primary alcohols, halide ions and protons.
  
  
0.940
AKR02079.1
Haloalkane dehalogenase.
  
  
 
0.925
AKQ99715.1
Zinc-type alcohol dehydrogenase AdhE1.
   
  0.911
AKR00375.1
Alcohol dehydrogenase B.
   
  0.911
AKR01239.1
Alcohol dehydrogenase.
   
 
 0.904
AKR01610.1
Alcohol dehydrogenase.
    
  0.903
AKR01236.1
Polyketide synthase.
  
 
 0.778
AKR00384.1
Oxidoreductase.
     
 0.657
AKR02411.1
Hypothetical protein.
 
     0.640
AKR01581.1
Hydrolase.
  
     0.635
Your Current Organism:
Mycobacterium tuberculosis variant bovis
NCBI taxonomy Id: 1765
Other names: ATCC 19210, CIP 105234, M. tuberculosis variant bovis, Mycobacterium bovis, Mycobacterium bovis subsp. bovis, Mycobacterium tuberculosis typus bovinus, Mycobacterium tuberculosis var. bovis, NCTC 10772
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