STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKR02457.1Transcriptional regulator. (223 aa)    
Predicted Functional Partners:
AKR02456.1
Transmembrane protein.
 
     0.920
AKR02455.1
Hypothetical protein.
 
    0.905
AKR02458.1
Methyltransferase.
 
     0.715
AKR03070.1
XRE family transcriptional regulator.
   
  
 0.671
AKR00409.1
Transcriptional regulator.
   
  
 0.651
AKR02453.1
Membrane protein.
 
     0.618
AKR01175.1
Transcriptional regulator.
   
    0.598
AKR02929.1
GntR family transcriptional regulator.
   
  
 0.586
AKR01393.1
Transcriptional regulator.
  
  
 0.572
AKR01739.1
LysR family transcriptional regulator.
   
  
 0.569
Your Current Organism:
Mycobacterium tuberculosis variant bovis
NCBI taxonomy Id: 1765
Other names: ATCC 19210, CIP 105234, M. tuberculosis variant bovis, Mycobacterium bovis, Mycobacterium bovis subsp. bovis, Mycobacterium tuberculosis typus bovinus, Mycobacterium tuberculosis var. bovis, NCTC 10772
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.