STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKR02552.1acyl-CoA dehydrogenase. (386 aa)    
Predicted Functional Partners:
AKR02892.1
Electron transfer flavoprotein subunit alpha.
 
 0.927
AKR02893.1
Electron transfer flavoprotein subunit beta.
 
 0.776
AKR00486.1
3-hydroxyacyl-CoA dehydrogenase.
 
 0.774
AKR03486.1
acyl-CoA dehydrogenase.
 
     0.739
AKR03485.1
acyl-CoA dehydrogenase.
  
  
 0.635
nuoI
NADH-quinone oxidoreductase subunit I; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.
  
 0.621
AKR00734.1
3-hydroxyisobutyryl-CoA hydrolase.
  
 0.605
AKR03434.1
enoyl-CoA hydratase.
  
 0.605
AKR00614.1
enoyl-CoA hydratase.
  
 0.604
AKR03472.1
enoyl-CoA hydratase.
  
 0.604
Your Current Organism:
Mycobacterium tuberculosis variant bovis
NCBI taxonomy Id: 1765
Other names: ATCC 19210, CIP 105234, M. tuberculosis variant bovis, Mycobacterium bovis, Mycobacterium bovis subsp. bovis, Mycobacterium tuberculosis typus bovinus, Mycobacterium tuberculosis var. bovis, NCTC 10772
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